Example input decks for each type of experiment.

1. grand_canonical_free_energy: This contains the input deck needed to produce a single free energy curve in the grand canonical ensemble. Specifically, it should reproduce the curve seen in figure 3. To run, copy both grand canonical free energy executable (see code README) into grand_canonical_free_energy and launch both using:
	mpirun -np 40 GrandCanonicalUmbrellaRe.out
	./GcMax.out UB
Calculating the free energy from the scaled histograms can be done by the user or with the utility program provided with the code. To launch this, copy it into the grand_canonical_free_energy and run
	./umbrella_hmo.out 40 650 3 15
This will produce a file called nuc_curve.csv. Each row of this file represent a different simulation (ie. different target nucleus) and each column the number of particles in the largest nucleus starting from 1.

2. canonical_free_energy: This contains the input deck needed to produce a single free energy curve in the canonical ensemble. Specifically, it should reproduce the N_0 = 100 curve seen in figure 7. To run, copy both canonical free energy executable (see code README) into grand_canonical_free_energy and launch both using:
	./CanonicalUmbrellaLsT.out 0;
	./CanonicalUmbrellaLsT.out 1;
	...
	./CanonicalUmbrellaLsT.out 9;
	./CanonicalLstMax.out UB
Calculating the free energy from the scaled histograms can be done by the user or with the utility program provided with the code. To launch this, copy it into the grand_canonical_free_energy and run
	./umbrella_hmoC.out 10 100 8 10
This will produce a file called nuc_curve.csv. Each row of this file represent a different simulation (ie. different target nucleus) and each column the number of particles in the largest nucleus starting from 1.

3. plane_phase_diagram: Contains a set of input decks that can be used to hunt for the phase diagram of Lennard-Jones particles confined to a plane. To use copy the phase diagram executable into each activity folder and run it with 
	mpirun -np 16 gc_mc_pt.out
then copy histogramPT_FLT.out, sort.sh, hist.sh into plane_phase_diagram and edit hist.sh to refer to histogramPT_FLT.out. Then run
	./sort.sh
	./hist.sh
in 2Dhist/density_average.csv you will find the density curves for each activity. Note that you need bimodal histograms to trace the coexistence curve, and these only occur close to coexistence, so you will need to run further simulations over smaller temperature ranges, to "zoom in" on coexistence. Then multiple histogram reweighting can be used to find coexistence histograms as described in the README for the phase diagram code.

3. sphere_phase_diagram: Contains a set of input decks that can be used to hunt for the phase diagram of Lennard-Jones particles confined to a sphere. To use copy the phase diagram executable into each activity folder and run it with 
	mpirun -np 16 gc_mc_pt.out
then copy histogramPT.out, sort.sh, hist.sh into plane_phase_diagram and run
	./sort.sh
	./hist.sh
in 2Dhist/density_average.csv you will find the density curves for each activity. Note that you need bimodal histograms to trace the coexistence curve, and these only occur close to coexistence, so you will need to run further simulations over smaller temperature ranges, to "zoom in" on coexistence. Then multiple histogram reweighting can be used to find coexistence histograms as described in the README for the phase diagram code.
